EnumerationsGenBankDBNameEnum Enumeration |
GenBank databases: From 1-3 Nucleic+Peptide databases, From 4-15 Nucleic databases, From 16-18 Peptide databases
Namespace:
Biolomics.SharedClasses
Assembly:
Biolomics.SharedClasses (in Biolomics.SharedClasses.dll) Version: 1.0.0.0 (1.0.0.0)
Syntax public enum GenBankDBNameEnum
Public Enumeration GenBankDBNameEnum
Members
| Member name | Value | Description |
---|
| nr | 0 |
All GenBank + RefSeq Nucleotides + EMBL + DDBJ + PDB sequences (excluding HTGS0,1,2, EST, GSS, STS, PAT, WGS). No longer "non-redundant".
|
| pat | 1 |
Nucleotides from the Patent division of GenBank.
|
| pdb | 2 |
sequences derived from the 3-dimensional structure from Brookhaven Protein Data Bank
|
| Month | 3 |
All new or revised GenBank + EMBL + DDBJ + PDB sequences released in the last 30 days.
|
| refseq_rna | 4 |
RNA entries from NCBI's Reference Sequence project
|
| refseq_genomic | 5 |
Genomic entries from NCBI's Reference Sequence project
|
| est | 6 |
Database of GenBank + EMBL + DDBJ sequences from EST Divisions
|
| est_human | 7 |
Human subset of est.
|
| est_mouse | 8 |
Mouse subset.
|
| est_others | 9 |
Non-Mouse, non-Human subset of est.
|
| gss | 10 |
Genome Survey Sequence, includes single-pass genomic data, exon-trapped sequences, and Alu PCR sequences.
|
| htgs | 11 |
Unfinished High Throughput Genomic sequences: phases 0, 1 and 2 (finished, phase 3 HTG sequences are in nr)
|
| dbsts | 12 |
Database of GenBank+EMBL+DDBJ sequences from STS Divisions .
|
| chromosome | 13 |
A database with complete genomes and chromosomes from the NCBI Reference Sequence project..
|
| wgs | 14 |
A database for whole genome shotgun sequence entries.
|
| env_nt | 15 |
Nucleotide sequences from environmental samples, including those from Sargasso Sea and Mine Drainage projects.
|
| refseq | 16 |
RefSeq protein sequences from NCBI's Reference Sequence Project.
|
| swissprot | 17 |
Last major release of the SWISS-PROT protein sequence database (no updates).
|
| env_nr | 18 |
Protein sequences from environmental samples.
|
See Also